| ID | hsa_circ_0000179 | |||||
| Alias | hsa_circ_000557 | |||||
| Position | chr1:212218001-212220759 | |||||
| Strand | + | |||||
| Genomic length | 2758 | |||||
| Spliced sequence length | 282 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_016448 | |||||
| Gene symbol | DTL | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | platelets | 11 | 11 | 0 | 0 | |
| Jeck2013 | Hs68_RNase | 61 | 46 | 18 | 12 | Hs68_control | 6 | 5 | 56 | 62 |
| Memczak2013 | HEK293 | 1 | 1 | 6 | 10 | neutr | 1 | 1 | 3 | 0 |
| Rybak2015 | SY5Y_exp2_D0 | 2 | 2 | 28 | 32 | cerebellum | 16 | 16 | 26 | 28 | Sy5y_exp1_D0 | 8 | 7 | 39 | 40 | frontal_cortex | 16 | 10 | 7 | 4 | parietal_lobe | 5 | 5 | 15 | 16 | temporal_lobe | 9 | 7 | 4 | 5 | Sy5y_exp1_D2 | 10 | 10 | 35 | 43 | occipital_lobe | 11 | 8 | 11 | 12 | Sy5y_exp1_D4 | 9 | 9 | 30 | 39 | diencephalon | 5 | 5 | 11 | 15 |
| Salzman2013 | K562 | 50 | 35 | 311 | 273 | Gm12878 | 46 | 23 | 116 | 64 | Sknshra | 4 | 1 | 20 | 9 | H1hesc | 20 | 7 | 179 | 50 | Bj | Nhek | 7 | 3 | 15 | 9 | Helas3 | 7 | 3 | 103 | 30 | Hepg2 | 6 | 2 | 97 | 23 | A549 | 11 | 6 | 40 | 22 | Ag04450 | 2 | 2 | 7 | 8 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||