| ID | hsa_circ_0000257 | |||||
| Alias | hsa_circ_000099 | |||||
| Position | chr10:103916775-103917971 | |||||
| Strand | + | |||||
| Genomic length | 1196 | |||||
| Spliced sequence length | 487 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_004741 | |||||
| Gene symbol | NOLC1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 176 | 71 | 5 | 3 | Hs68_control | 1 | 1 | 29 | 56 |
| Memczak2013 | HEK293 | cd_19 | 6 | 3 | 6 | 1 |
| Rybak2015 | cerebellum | 5 | 3 | 8 | 19 | Sy5y_exp1_D0 | 5 | 4 | 34 | 53 | frontal_cortex | 28 | 19 | 10 | 16 | parietal_lobe | 10 | 9 | 13 | 15 | Sy5y_exp1_D2 | 3 | 3 | 26 | 55 | temporal_lobe | 8 | 4 | 11 | 14 | occipital_lobe | 17 | 13 | 15 | 24 | diencephalon | 7 | 7 | 17 | 50 |
| Salzman2013 | K562 | 13 | 9 | 185 | 222 | Gm12878 | 21 | 14 | 70 | 62 | Sknshra | 4 | 4 | 49 | 21 | H1hesc | Bj | 2 | 2 | 35 | 17 | Nhek | Helas3 | 4 | 4 | 119 | 54 | Hepg2 | 21 | 9 | 92 | 58 | A549 | 2 | 2 | 76 | 56 | Ag04450 | 9 | 8 | 57 | 46 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||