ID | hsa_circ_0000267 | |||||
Alias | hsa_circ_000105 | |||||
Position | chr10:126370175-126370948 | |||||
Strand | - | |||||
Genomic length | 773 | |||||
Spliced sequence length | 773 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_014661 | |||||
Gene symbol | FAM53B | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | platelets | 2 | 2 | 0 | 0 | ada_scid | 3 | 3 | 2 | 2 | adipose | 3 | 3 | 5 | 2 | WAS2 | 2 | 2 | 6 | 4 |
Jeck2013 | Hs68_RNase | 180 | 82 | 30 | 9 | Hs68_control | 10 | 10 | 12 | 4 |
Memczak2013 | cd_19 | 3 | 2 | 11 | 14 | |
Rybak2015 | cerebellum | 173 | 101 | 109 | 47 | Sy5y_exp1_D0 | 8 | 7 | 15 | 9 | frontal_cortex | 477 | 147 | 121 | 37 | parietal_lobe | 160 | 94 | 98 | 46 | temporal_lobe | 156 | 59 | 49 | 26 | Sy5y_exp1_D2 | 4 | 4 | 16 | 5 | occipital_lobe | 304 | 118 | 130 | 37 | SY5Y_exp2_D4 | 3 | 3 | 13 | 7 | Sy5y_exp1_D4 | 2 | 2 | 5 | 8 | diencephalon | 232 | 122 | 89 | 36 |
Salzman2013 | Hsmm | 63 | 7 | 20 | 11 | K562 | 85 | 63 | 63 | 6 | Mcf7 | 86 | 19 | 79 | 6 | Gm12878 | 62 | 40 | 89 | 14 | Sknshra | 73 | 29 | 24 | 17 | H1hesc | 73 | 35 | 88 | 17 | Bj | 42 | 14 | 8 | 5 | Nhek | 42 | 20 | 74 | 30 | Huvec | 33 | 11 | 27 | 12 | Helas3 | 32 | 20 | 28 | 26 | Hepg2 | 26 | 15 | 15 | 28 | A549 | 26 | 14 | 27 | 7 | Ag04450 | 37 | 21 | 28 | 14 | Hmec |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |