| ID | hsa_circ_0000285 | |||||
| Alias | hsa_circ_000111 | |||||
| Position | chr11:33362513-33363232 | |||||
| Strand | + | |||||
| Genomic length | 719 | |||||
| Spliced sequence length | 284 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_005734 | |||||
| Gene symbol | HIPK3 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | cd_19 | 10 | 5 | 3 | 4 | |
| Rybak2015 | temporal_lobe | 18 | 8 | 53 | 63 | cerebellum | 3 | 3 | 90 | 119 | occipital_lobe | 8 | 3 | 87 | 88 | frontal_cortex | 20 | 12 | 82 | 99 |
| Salzman2013 | K562 | Huvec | 1 | 1 | 21 | 76 | Helas3 | 2 | 2 | 27 | 120 | Gm12878 | 3 | 2 | 36 | 100 | Ag04450 | 2 | 1 | 51 | 75 | Sknshra | 1 | 1 | 32 | 59 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||