| ID | hsa_circ_0000467 | |||||
| Alias | hsa_circ_000158 | |||||
| Position | chr13:21742126-21742538 | |||||
| Strand | - | |||||
| Genomic length | 412 | |||||
| Spliced sequence length | 412 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_145061 | |||||
| Gene symbol | SKA3 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | LCL | 3 | 3 | 5 | 3 | platelets | 8 | 7 | 11 | 11 | WAS2 | 2 | 2 | 4 | 6 |
| Memczak2013 | neutr | 2 | 1 | 2 | 1 | cd_19 | 4 | 2 | 9 | 8 |
| Rybak2015 | cerebellum | 29 | 24 | 43 | 39 | Sy5y_exp1_D0 | 5 | 5 | 20 | 24 | frontal_cortex | 62 | 34 | 32 | 29 | parietal_lobe | 19 | 16 | 37 | 25 | temporal_lobe | 18 | 10 | 9 | 14 | Sy5y_exp1_D2 | 8 | 6 | 15 | 8 | occipital_lobe | 42 | 29 | 33 | 13 | Sy5y_exp1_D4 | 2 | 2 | 15 | 11 | diencephalon | 18 | 16 | 21 | 10 |
| Salzman2013 | K562 | 26 | 22 | 79 | 59 | Bj | 3 | 2 | 5 | 0 | Huvec | 1 | 1 | 3 | 1 | Ag04450 | 8 | 6 | 9 | 7 | Gm12878 | 34 | 19 | 53 | 6 | Sknshra | 6 | 3 | 1 | 1 | H1hesc | 6 | 3 | 70 | 21 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||