ID | hsa_circ_0000523 | |||||
Alias | hsa_circ_000169 | |||||
Position | chr14:21971315-21972024 | |||||
Strand | - | |||||
Genomic length | 709 | |||||
Spliced sequence length | 623 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_019852 | |||||
Gene symbol | METTL3 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | adipose | 3 | 3 | 0 | 5 | decidua | 3 | 3 | 0 | 0 | WAS2 | 7 | 7 | 5 | 9 |
Memczak2013 | cd_34 | 45 | 3 | 0 | 0 | cd_19 | 7 | 4 | 2 | 0 |
Jeck2013 | Hs68_RNase | 379 | 148 | 12 | 12 | Hs68_control | 8 | 8 | 31 | 39 |
Rybak2015 | SY5Y_exp2_D0 | 2 | 2 | 12 | 19 | cerebellum | 216 | 136 | 105 | 45 | Sy5y_exp1_D0 | 14 | 13 | 25 | 20 | frontal_cortex | 684 | 177 | 106 | 46 | parietal_lobe | 269 | 121 | 94 | 62 | temporal_lobe | 257 | 89 | 32 | 27 | Sy5y_exp1_D2 | 13 | 12 | 17 | 31 | occipital_lobe | 416 | 152 | 81 | 46 | SY5Y_exp2_D4 | 3 | 3 | 11 | 12 | Sy5y_exp1_D4 | 5 | 4 | 15 | 20 | diencephalon | 195 | 118 | 70 | 58 |
Salzman2013 | K562 | 151 | 100 | 109 | 88 | Hsmm | 40 | 8 | 40 | 0 | Mcf7 | 83 | 17 | 96 | 2 | Gm12878 | 336 | 109 | 77 | 31 | Sknshra | 145 | 66 | 86 | 9 | H1hesc | 199 | 54 | 173 | 64 | Bj | 67 | 31 | 31 | 2 | Nhek | 170 | 40 | 93 | 35 | Huvec | 32 | 12 | 56 | 12 | Helas3 | 130 | 45 | 141 | 12 | Hepg2 | 157 | 44 | 102 | 4 | A549 | 107 | 33 | 81 | 12 | Ag04450 | 115 | 58 | 41 | 14 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |