ID | hsa_circ_0000524 | |||||
Alias | hsa_circ_002009 | |||||
Position | chr14:23378691-23380612 | |||||
Strand | - | |||||
Genomic length | 1921 | |||||
Spliced sequence length | 189 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_001077352 | |||||
Gene symbol | RBM23 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | WAS2 | 6 | 6 | 6 | 7 | vena_cava | 5 | 5 | 2 | 4 | LCL | 2 | 2 | 4 | 3 | neutophils | 11 | 10 | 5 | 5 | VSMC | 2 | 2 | 0 | 2 | ada_scid | 2 | 2 | 0 | 5 | muscle | 3 | 3 | 0 | 0 | platelets | 37 | 23 | 0 | 0 | adipose | 9 | 6 | 2 | 5 | decidua | 4 | 4 | 0 | 2 | right_atrium | 2 | 2 | 4 | 0 |
Memczak2013 | neutr | 8 | 3 | 0 | 4 | cd_19 | 15 | 8 | 0 | 14 |
Jeck2013 | Hs68_RNase | 302 | 117 | 6 | 65 | Hs68_control | 12 | 10 | 59 | 57 |
Rybak2015 | SY5Y_exp2_D0 | 4 | 4 | 19 | 11 | cerebellum | 562 | 210 | 67 | 107 | Sy5y_exp1_D0 | 3 | 3 | 24 | 26 | frontal_cortex | 1423 | 227 | 79 | 155 | parietal_lobe | 490 | 168 | 81 | 94 | temporal_lobe | 123 | 44 | 69 | 78 | Sy5y_exp1_D2 | 3 | 3 | 21 | 17 | occipital_lobe | 566 | 162 | 61 | 97 | Sy5y_exp1_D4 | 4 | 4 | 14 | 19 | diencephalon | 481 | 177 | 78 | 116 |
Salzman2013 | K562 | 185 | 113 | 33 | 197 | Gm12878 | 65 | 34 | 13 | 115 | Sknshra | 57 | 22 | 39 | 72 | H1hesc | 10 | 4 | 4 | 101 | Bj | 13 | 5 | 31 | 41 | Nhek | 11 | 3 | 5 | 48 | Huvec | 8 | 3 | 11 | 55 | Hepg2 | 1 | 1 | 27 | 28 | A549 | 41 | 18 | 32 | 47 | Ag04450 | 66 | 37 | 46 | 91 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |