ID | hsa_circ_0000915 | |||||
Alias | hsa_circ_000271 | |||||
Position | chr19:18650180-18650530 | |||||
Strand | - | |||||
Genomic length | 350 | |||||
Spliced sequence length | 259 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_012181 | |||||
Gene symbol | FKBP8 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | platelets | 2 | 2 | 52 | 68 | muscle | 2 | 2 | 9 | 6 | cortex | 4 | 4 | 15 | 13 |
Memczak2013 | cd_34 | neutr | cd_19 | 17 | 5 | 9 | 7 |
Rybak2015 | cerebellum | 139 | 103 | 77 | 155 | Sy5y_exp1_D0 | 13 | 10 | 56 | 67 | frontal_cortex | 652 | 203 | 140 | 220 | parietal_lobe | 153 | 91 | 98 | 153 | temporal_lobe | 111 | 59 | 115 | 107 | Sy5y_exp1_D2 | 5 | 5 | 49 | 51 | SY5Y_exp2_D8 | 2 | 2 | 21 | 16 | occipital_lobe | 223 | 112 | 95 | 142 | SY5Y_exp2_D4 | 7 | 6 | 22 | 27 | Sy5y_exp1_D4 | 6 | 6 | 44 | 40 | diencephalon | 235 | 138 | 171 | 269 |
Salzman2013 | Hsmm | K562 | 44 | 41 | 15 | 57 | Mcf7 | 5 | 5 | 17 | 62 | Nhlf | 32 | 5 | 16 | 125 | Gm12878 | 46 | 38 | 56 | 124 | Sknshra | 138 | 58 | 17 | 151 | H1hesc | 100 | 63 | 37 | 135 | Bj | 116 | 40 | 37 | 208 | Nhek | 37 | 21 | 50 | 220 | Huvec | 18 | 9 | 34 | 90 | Helas3 | 34 | 18 | 35 | 200 | Hepg2 | 28 | 19 | 40 | 187 | A549 | 20 | 9 | 3 | 58 | Ag04450 | 92 | 51 | 18 | 121 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |