ID | hsa_circ_0000976 | |||||
Alias | hsa_circ_000296 | |||||
Position | chr2:10559859-10560261 | |||||
Strand | + | |||||
Genomic length | 402 | |||||
Spliced sequence length | 402 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_002149 | |||||
Gene symbol | HPCAL1 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | platelets | 2 | 2 | 4 | 14 | |
Jeck2013 | Hs68_RNase | 282 | 113 | 67 | 46 | Hs68_control | 12 | 12 | 122 | 105 |
Memczak2013 | cd_34 | 27 | 6 | 4 | 0 | cd_19 |
Rybak2015 | temporal_lobe | 59 | 32 | 29 | 23 | cerebellum | 53 | 39 | 93 | 78 | occipital_lobe | 34 | 28 | 27 | 27 | frontal_cortex | 198 | 108 | 59 | 45 | parietal_lobe | 37 | 30 | 50 | 51 | diencephalon | 37 | 33 | 67 | 60 |
Salzman2013 | K562 | 7 | 7 | 5 | 42 | Nhlf | 2 | 1 | 7 | 49 | Gm12878 | 24 | 20 | 7 | 17 | Sknshra | H1hesc | 3 | 2 | 4 | 5 | Bj | 5 | 5 | 5 | 12 | Nhek | 19 | 14 | 18 | 31 | Helas3 | 14 | 14 | 41 | 77 | Hepg2 | 14 | 12 | 19 | 64 | A549 | 6 | 6 | 6 | 73 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |