| ID | hsa_circ_0001018 | |||||
| Alias | hsa_circ_001890 | |||||
| Position | chr2:62100136-62103369 | |||||
| Strand | - | |||||
| Genomic length | 3233 | |||||
| Spliced sequence length | 348 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_006430 | |||||
| Gene symbol | CCT4 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | platelets | 2 | 2 | 5 | 0 | |
| Memczak2013 | cd_34 | 15 | 5 | 7 | 12 | cd_19 | 1 | 1 | 13 | 9 |
| Jeck2013 | Hs68_RNase | 4 | 3 | 44 | 27 | Hs68_control | 1 | 1 | 208 | 179 |
| Rybak2015 | temporal_lobe | 6 | 2 | 176 | 123 | cerebellum | 8 | 8 | 165 | 162 | occipital_lobe | 21 | 13 | 197 | 163 | frontal_cortex | 13 | 8 | 214 | 194 | parietal_lobe | 6 | 6 | 151 | 133 | diencephalon | 3 | 3 | 208 | 170 |
| Salzman2013 | K562 | 2 | 2 | 235 | 337 | Helas3 | 1 | 1 | 44 | 55 | Ag04450 | A549 | 2 | 1 | 98 | 106 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||