ID | hsa_circ_0001387 | |||||
Alias | hsa_circ_001422 | |||||
Position | chr4:1902352-1936989 | |||||
Strand | + | |||||
Genomic length | 34637 | |||||
Spliced sequence length | 1703 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_001042424 | |||||
Gene symbol | WHSC1 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Memczak2013 | cd_19 | 6 | 4 | 0 | 5 | |
Jeck2013 | Hs68_RNase | 102 | 58 | 42 | 83 | Hs68_control | 9 | 8 | 56 | 100 |
Rybak2015 | SY5Y_exp2_D0 | 6 | 4 | 29 | 52 | cerebellum | 9 | 8 | 72 | 100 | Sy5y_exp1_D0 | 10 | 9 | 35 | 53 | frontal_cortex | 87 | 50 | 147 | 177 | parietal_lobe | 15 | 12 | 122 | 133 | temporal_lobe | 66 | 30 | 58 | 117 | Sy5y_exp1_D2 | 3 | 3 | 23 | 48 | SY5Y_exp2_D8 | 2 | 2 | 17 | 40 | occipital_lobe | 41 | 26 | 144 | 131 | Sy5y_exp1_D4 | 8 | 8 | 23 | 64 | diencephalon | 42 | 34 | 87 | 159 |
Salzman2013 | K562 | 39 | 28 | 72 | 161 | Ag04450 | 17 | 9 | 24 | 38 | A549 | 5 | 4 | 24 | 25 | H1hesc | 64 | 32 | 57 | 68 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |