ID | hsa_circ_0001461 | |||||
Alias | hsa_circ_000713 | |||||
Position | chr4:187627716-187630999 | |||||
Strand | - | |||||
Genomic length | 3283 | |||||
Spliced sequence length | 3283 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_005245 | |||||
Gene symbol | FAT1 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | VSMC | 4 | 4 | 24 | 15 | osteocytes | 4 | 4 | 3 | 7 | chondrocytes | 2 | 2 | 0 | 2 | adipose | 2 | 2 | 20 | 8 | vena_cava | 7 | 7 | 3 | 3 | right_atrium | 6 | 6 | 0 | 9 | MSC_047 | 3 | 3 | 10 | 11 |
Memczak2013 | HEK293 | 2 | 2 | 2 | 3 | |
Rybak2015 | SY5Y_exp2_D0 | 4 | 4 | 0 | 7 | cerebellum | 51 | 45 | 123 | 100 | Sy5y_exp1_D0 | 8 | 8 | 6 | 10 | frontal_cortex | 49 | 24 | 45 | 28 | parietal_lobe | 12 | 11 | 78 | 59 | temporal_lobe | 9 | 6 | 39 | 17 | Sy5y_exp1_D2 | 4 | 3 | 7 | 3 | occipital_lobe | 49 | 26 | 59 | 45 | Sy5y_exp1_D4 | 2 | 2 | 3 | 7 | diencephalon | 131 | 88 | 86 | 101 |
Salzman2013 | K562 | 91 | 63 | 24 | 87 | Mcf7 | Sknshra | 23 | 13 | 151 | 69 | H1hesc | 409 | 118 | 163 | 253 | Bj | 347 | 107 | 436 | 181 | Nhek | 129 | 33 | 712 | 544 | Helas3 | 357 | 126 | 355 | 194 | Hepg2 | 768 | 110 | 377 | 118 | A549 | 550 | 120 | 362 | 253 | Ag04450 | 464 | 174 | 601 | 324 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |