ID | hsa_circ_0001467 | |||||
Alias | hsa_circ_001306 | |||||
Position | chr5:10415599-10417516 | |||||
Strand | + | |||||
Genomic length | 1917 | |||||
Spliced sequence length | 317 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_005885 | |||||
Gene symbol | MARCH6 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | platelets | 5 | 5 | 15 | 10 | placenta | 2 | 2 | 6 | 5 | WAS2 | 7 | 7 | 18 | 14 | right_atrium | 2 | 2 | 13 | 5 |
Memczak2013 | cd_19 | 5 | 3 | 6 | 3 | |
Jeck2013 | Hs68_RNase | 145 | 72 | 18 | 22 | Hs68_control | 2 | 2 | 68 | 76 |
Rybak2015 | cerebellum | 23 | 20 | 178 | 245 | Sy5y_exp1_D0 | 3 | 3 | 40 | 47 | frontal_cortex | 97 | 53 | 173 | 226 | parietal_lobe | 49 | 36 | 167 | 212 | Sy5y_exp1_D2 | 2 | 2 | 41 | 43 | temporal_lobe | 84 | 42 | 212 | 178 | occipital_lobe | 52 | 39 | 163 | 277 | diencephalon | 41 | 37 | 200 | 242 |
Salzman2013 | K562 | 128 | 95 | 552 | 405 | Mcf7 | 26 | 11 | 146 | 38 | Gm12878 | 34 | 20 | 196 | 132 | H1hesc | 67 | 37 | 309 | 200 | Bj | 65 | 25 | 181 | 106 | Nhek | 50 | 17 | 260 | 137 | Helas3 | 64 | 31 | 346 | 196 | Huvec | 11 | 4 | 184 | 117 | Hepg2 | 51 | 19 | 371 | 150 | A549 | 26 | 10 | 192 | 116 | Ag04450 | 43 | 21 | 185 | 125 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |