circBase

ID	hsa_circ_0001566
Alias	hsa_circ_001168
Position	chr5:179688683-179707608
Strand	-
Genomic length	18925
Spliced sequence length	497
Annotation	ANNOTATED CDS coding INTERNAL OVCODE OVEXON UTR5
Repeats	None
Best transcript	NM_139069
Gene symbol	MAPK9
Scores	circRNA study	Sample	total reads circular junction	unique reads circular junction	unique reads linear-5' junctions	unique reads linear-3' junctions
	Maass2017	LCL	2	2	0	2
	Maass2017	EPC	2	2	0	0
	Jeck2013	Hs68_RNase	60	41	3	8
	Jeck2013	Hs68_control	5	5	39	56
	Memczak2013	cd_19	5	3	0	2
	Rybak2015	SY5Y_exp2_D0	2	2	0	12
		cerebellum	170	105	42	110
		Sy5y_exp1_D0	9	9	4	12
		frontal_cortex	565	155	57	114
		parietal_lobe	156	92	33	71
		temporal_lobe	230	88	38	56
		occipital_lobe	460	161	52	98
		Sy5y_exp1_D4	4	4	6	14
		diencephalon	149	93	87	158
	Salzman2013	K562	54	42	30	79
		Mcf7	137	25	28	19
		Gm12878	36	19	34	37
		Sknshra	32	16	21	38
		H1hesc	55	23	25	38
		Bj	29	12	13	29
		Nhek	15	7	19	39
		Huvec	8	3	15	31
		Helas3	68	33	40	57
		Hepg2	50	16	38	66
		A549	45	23	37	53
		Ag04450	35	24	17	54
Aligned reads	Memczak 2013 circRNA study (pooled samples)