| ID | hsa_circ_0001917 | |||||
| Alias | hsa_circ_001663 | |||||
| Position | chrX:41519691-41530783 | |||||
| Strand | - | |||||
| Genomic length | 11092 | |||||
| Spliced sequence length | 402 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001126055 | |||||
| Gene symbol | CASK | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | cd_19 | 9 | 6 | 1 | 2 | |
| Rybak2015 | temporal_lobe | 61 | 30 | 121 | 88 | cerebellum | 44 | 33 | 157 | 122 | occipital_lobe | 77 | 31 | 152 | 120 | Sy5y_exp1_D0 | 2 | 2 | 21 | 20 | frontal_cortex | 110 | 51 | 152 | 157 | parietal_lobe | 39 | 26 | 136 | 142 | diencephalon | 86 | 55 | 227 | 178 |
| Salzman2013 | K562 | 2 | 1 | 13 | 8 | Gm12878 | 10 | 5 | 98 | 67 | Sknshra | 4 | 2 | 87 | 42 | H1hesc | 5 | 3 | 120 | 66 | Bj | 4 | 2 | 41 | 14 | Nhek | 1 | 1 | 71 | 38 | Hepg2 | 13 | 5 | 47 | 13 | A549 | 4 | 2 | 68 | 36 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||