ID | hsa_circ_0004458 | |||||
Position | chr8:18656804-18662408 | |||||
Strand | - | |||||
Genomic length | 5604 | |||||
Spliced sequence length | 448 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_015310 | |||||
Gene symbol | PSD3 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | platelets | 7 | 6 | 2 | 2 | cortex | 3 | 3 | 6 | 2 | vena_cava | 5 | 5 | 23 | 11 | EPC | 2 | 2 | 0 | 2 |
Jeck2013 | Hs68_RNase | 941 | 175 | 26 | 155 | Hs68_control | 35 | 30 | 23 | 27 |
Rybak2015 | SY5Y_exp2_D0 | 5 | 5 | 19 | 12 | cerebellum | 147 | 94 | 124 | 117 | Sy5y_exp1_D0 | 14 | 10 | 24 | 18 | frontal_cortex | 584 | 141 | 206 | 186 | parietal_lobe | 154 | 67 | 147 | 120 | temporal_lobe | 205 | 76 | 177 | 142 | Sy5y_exp1_D2 | 4 | 4 | 9 | 6 | SY5Y_exp2_D8 | 3 | 3 | 7 | 0 | occipital_lobe | 293 | 105 | 153 | 156 | Sy5y_exp1_D4 | 4 | 3 | 11 | 5 | diencephalon | 159 | 89 | 100 | 110 |
Salzman2013 | K562 | 2 | 2 | 2 | 0 | Hsmm | Mcf7 | 7 | 5 | 17 | 1 | Sknshra | 60 | 38 | 165 | 76 | H1hesc | 34 | 20 | 53 | 30 | Bj | 28 | 19 | 48 | 22 | Nhek | 43 | 17 | 46 | 20 | Helas3 | 39 | 21 | 26 | 16 | Huvec | 14 | 5 | 21 | 3 | Hepg2 | 21 | 11 | 25 | 10 | A549 | 44 | 29 | 91 | 54 | Ag04450 | 48 | 34 | 62 | 48 |