ID | hsa_circ_0005941 | |||||
Position | chr16:53907697-53922863 | |||||
Strand | + | |||||
Genomic length | 15166 | |||||
Spliced sequence length | 344 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_001080432 | |||||
Gene symbol | FTO | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | WAS2 | 3 | 3 | 9 | 9 | vena_cava | 7 | 7 | 4 | 8 | LCL | 3 | 3 | 4 | 0 | ada_scid | 2 | 2 | 6 | 4 | muscle | 3 | 2 | 0 | 5 | platelets | 4 | 3 | 3 | 0 | cortex | 2 | 2 | 9 | 10 | right_atrium | 4 | 4 | 11 | 7 |
Jeck2013 | Hs68_RNase | 186 | 86 | 26 | 16 | Hs68_control | 13 | 12 | 26 | 29 |
Rybak2015 | SY5Y_exp2_D0 | 2 | 2 | 9 | 22 | cerebellum | 131 | 103 | 169 | 133 | Sy5y_exp1_D0 | 3 | 3 | 25 | 17 | frontal_cortex | 532 | 166 | 167 | 146 | parietal_lobe | 158 | 96 | 162 | 142 | temporal_lobe | 287 | 99 | 120 | 118 | SY5Y_exp2_D8 | 2 | 2 | 12 | 24 | occipital_lobe | 181 | 92 | 168 | 117 | diencephalon | 272 | 163 | 168 | 200 |
Salzman2013 | K562 | 36 | 22 | 71 | 60 | Gm12878 | 21 | 13 | 79 | 41 | Sknshra | 32 | 9 | 96 | 43 | H1hesc | 27 | 11 | 104 | 14 | Bj | 35 | 14 | 75 | 19 | Nhek | 62 | 20 | 89 | 33 | Helas3 | 8 | 3 | 94 | 8 | Hepg2 | 19 | 8 | 76 | 4 | A549 | 13 | 9 | 106 | 40 | Ag04450 | 44 | 23 | 90 | 81 |