ID | hsa_circ_0006646 | |||||
Position | chr8:141889569-141900868 | |||||
Strand | - | |||||
Genomic length | 11299 | |||||
Spliced sequence length | 394 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_001199649 | |||||
Gene symbol | PTK2 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | LCL | 2 | 2 | 2 | 2 | HUAEC | 2 | 2 | 11 | 14 | platelets | 2 | 2 | 4 | 22 | adipose | 2 | 2 | 3 | 16 | cortex | 2 | 2 | 5 | 8 | right_atrium | 2 | 2 | 3 | 8 |
Jeck2013 | Hs68_RNase | 147 | 71 | 58 | 262 | Hs68_control | 18 | 15 | 47 | 72 |
Rybak2015 | temporal_lobe | 111 | 38 | 69 | 248 | cerebellum | 128 | 90 | 266 | 389 | Sy5y_exp1_D0 | 3 | 3 | 15 | 30 | occipital_lobe | 112 | 54 | 119 | 334 | frontal_cortex | 192 | 82 | 123 | 390 | parietal_lobe | 75 | 41 | 145 | 254 | diencephalon | 107 | 68 | 158 | 344 |
Salzman2013 | K562 | 58 | 34 | 60 | 150 | Nhlf | 17 | 1 | 8 | 0 | Mcf7 | 90 | 11 | 35 | 30 | Gm12878 | 3 | 2 | 6 | 23 | Sknshra | 27 | 13 | 41 | 78 | H1hesc | 57 | 21 | 62 | 117 | Bj | 73 | 27 | 30 | 66 | Nhek | 10 | 2 | 53 | 107 | Helas3 | 57 | 15 | 41 | 50 | Huvec | 69 | 15 | 75 | 53 | Hepg2 | 75 | 19 | 52 | 53 | A549 | 90 | 33 | 32 | 88 | Ag04450 | 74 | 38 | 58 | 119 |