ID | hsa_circ_0007905 | |||||
Position | chr1:180953812-180962561 | |||||
Strand | - | |||||
Genomic length | 8749 | |||||
Spliced sequence length | 391 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_005819 | |||||
Gene symbol | STX6 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | LCL | 2 | 2 | 7 | 2 | platelets | 2 | 2 | 2 | 2 | placenta | 3 | 2 | 0 | 0 | WAS2 | 4 | 4 | 14 | 10 |
Jeck2013 | Hs68_RNase | 179 | 73 | 76 | 89 | Hs68_control | 21 | 16 | 33 | 41 |
Rybak2015 | SY5Y_exp2_D0 | 9 | 9 | 27 | 17 | cerebellum | 100 | 59 | 99 | 90 | Sy5y_exp1_D0 | 4 | 3 | 23 | 10 | frontal_cortex | 329 | 122 | 136 | 138 | parietal_lobe | 77 | 58 | 81 | 106 | temporal_lobe | 80 | 37 | 73 | 78 | Sy5y_exp1_D2 | 12 | 7 | 29 | 25 | occipital_lobe | 244 | 93 | 124 | 101 | SY5Y_exp2_D4 | 2 | 2 | 23 | 10 | Sy5y_exp1_D4 | 6 | 5 | 28 | 15 | diencephalon | 56 | 36 | 98 | 87 |
Salzman2013 | K562 | 75 | 51 | 99 | 77 | Mcf7 | 11 | 2 | 0 | 86 | Gm12878 | 50 | 27 | 58 | 125 | Sknshra | 15 | 7 | 13 | 79 | H1hesc | 68 | 23 | 59 | 118 | Bj | 21 | 12 | 8 | 86 | Nhek | 11 | 5 | 39 | 105 | Helas3 | 4 | 3 | 5 | 83 | Huvec | 4 | 2 | 12 | 63 | Hepg2 | 25 | 8 | 1 | 62 | A549 | 17 | 8 | 7 | 53 | Ag04450 | 35 | 20 | 24 | 92 |