ID | hsa_circ_0008394 | |||||
Position | chr3:119222378-119222868 | |||||
Strand | + | |||||
Genomic length | 490 | |||||
Spliced sequence length | 157 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_016589 | |||||
Gene symbol | TIMMDC1 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | platelets | 8 | 6 | 8 | 4 | adipose | 2 | 2 | 6 | 6 |
Jeck2013 | Hs68_RNase | 33 | 21 | 129 | 85 | Hs68_control | 3 | 3 | 130 | 94 |
Rybak2015 | SY5Y_exp2_D0 | 2 | 2 | 25 | 30 | temporal_lobe | 10 | 7 | 56 | 85 | cerebellum | 39 | 29 | 78 | 111 | occipital_lobe | 54 | 35 | 112 | 104 | frontal_cortex | 113 | 65 | 137 | 141 | parietal_lobe | 104 | 60 | 76 | 94 | diencephalon | 42 | 29 | 97 | 104 |
Salzman2013 | K562 | 190 | 105 | 135 | 144 | Hsmm | Mcf7 | 45 | 8 | 11 | 1 | Gm12878 | 151 | 54 | 38 | 44 | Sknshra | 253 | 86 | 117 | 86 | H1hesc | 100 | 40 | 83 | 70 | Bj | 69 | 31 | 50 | 26 | Nhek | 86 | 27 | 96 | 87 | Huvec | 60 | 14 | 36 | 32 | Helas3 | 35 | 16 | 55 | 23 | Hepg2 | 30 | 8 | 45 | 37 | A549 | 160 | 59 | 69 | 46 | Ag04450 | 114 | 44 | 69 | 50 |