ID | hsa_circ_0008460 | |||||
Position | chr4:1902352-1906105 | |||||
Strand | + | |||||
Genomic length | 3753 | |||||
Spliced sequence length | 789 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_133334 | |||||
Gene symbol | WHSC1 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | WAS2 | 3 | 3 | 11 | 29 | |
Jeck2013 | Hs68_RNase | 476 | 152 | 42 | 184 | Hs68_control | 16 | 16 | 56 | 129 |
Rybak2015 | SY5Y_exp2_D0 | 5 | 4 | 29 | 53 | cerebellum | 48 | 39 | 72 | 199 | Sy5y_exp1_D0 | 8 | 7 | 35 | 94 | frontal_cortex | 244 | 99 | 147 | 273 | parietal_lobe | 57 | 43 | 122 | 233 | temporal_lobe | 92 | 42 | 58 | 158 | Sy5y_exp1_D2 | 3 | 3 | 23 | 77 | SY5Y_exp2_D8 | 2 | 2 | 17 | 41 | occipital_lobe | 187 | 99 | 144 | 222 | Sy5y_exp1_D4 | 2 | 2 | 23 | 72 | diencephalon | 47 | 40 | 87 | 296 |
Salzman2013 | K562 | 80 | 52 | 72 | 296 | Mcf7 | 24 | 6 | 29 | 66 | Gm12878 | 70 | 43 | 53 | 113 | Sknshra | 13 | 7 | 22 | 99 | H1hesc | 13 | 5 | 57 | 135 | Bj | 8 | 3 | 19 | 85 | Nhek | 14 | 6 | 15 | 52 | Huvec | 9 | 3 | 21 | 97 | Helas3 | 10 | 6 | 20 | 111 | Hepg2 | 11 | 4 | 20 | 208 | A549 | 8 | 4 | 24 | 109 | Ag04450 | 35 | 22 | 24 | 108 | Hmec |