| ID | hsa_circ_0000028 | |||||
| Alias | hsa_circ_000561 | |||||
| Position | chr1:22041881-22048257 | |||||
| Strand | - | |||||
| Genomic length | 6376 | |||||
| Spliced sequence length | 315 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_032236 | |||||
| Gene symbol | USP48 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | platelets | 4 | 3 | 4 | 0 | WAS2 | 2 | 2 | 15 | 5 |
| Jeck2013 | Hs68_RNase | 3 | 3 | 5 | 0 | Hs68_control | 1 | 1 | 8 | 7 |
| Memczak2013 | cd_19 | 2 | 2 | 4 | 5 | |
| Rybak2015 | temporal_lobe | 8 | 5 | 44 | 49 | Sy5y_exp1_D2 | 2 | 2 | 15 | 6 | cerebellum | 17 | 15 | 100 | 44 | occipital_lobe | 57 | 35 | 98 | 49 | frontal_cortex | 75 | 31 | 99 | 50 | parietal_lobe | 15 | 13 | 73 | 45 | diencephalon | 34 | 27 | 92 | 57 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||