ID | hsa_circ_0000034 | |||||
Alias | hsa_circ_001787 | |||||
Position | chr1:26772806-26774151 | |||||
Strand | + | |||||
Genomic length | 1345 | |||||
Spliced sequence length | 219 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_205861 | |||||
Gene symbol | DHDDS | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | EPC | 2 | 2 | 6 | 3 | |
Jeck2013 | Hs68_RNase | 334 | 114 | 28 | 50 | Hs68_control | 12 | 9 | 45 | 61 |
Memczak2013 | cd_34 | 10 | 3 | 0 | 0 | neutr |
Rybak2015 | temporal_lobe | 19 | 12 | 45 | 32 | cerebellum | 32 | 27 | 35 | 34 | occipital_lobe | 57 | 39 | 34 | 32 | Sy5y_exp1_D0 | 6 | 4 | 11 | 13 | frontal_cortex | 120 | 62 | 35 | 44 | parietal_lobe | 77 | 53 | 32 | 42 | diencephalon | 42 | 31 | 30 | 33 |
Salzman2013 | K562 | 64 | 53 | 81 | 75 | Gm12878 | 67 | 35 | 36 | 45 | Sknshra | 55 | 32 | 33 | 43 | H1hesc | 16 | 5 | 40 | 70 | Bj | 104 | 47 | 17 | 64 | Nhek | 78 | 26 | 27 | 31 | Huvec | 60 | 17 | 24 | 56 | Helas3 | 83 | 41 | 17 | 43 | Hepg2 | 66 | 30 | 15 | 70 | A549 | 64 | 30 | 17 | 41 | Ag04450 | 122 | 66 | 45 | 68 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |