ID hsa_circ_0000061
Aliashsa_circ_002155
Position chr1:41536266-41541123
Strand -
Genomic length 4857
Spliced sequence length 360
Annotation
  • ANNOTATED
  • CDS
  • coding
  • INTERNAL
  • OVCODE
  • OVEXON
Repeats None
Best transcript NM_001172220
Gene symbol SCMH1
Scores circRNA study Sample total reads
circular junction
unique reads
circular junction
unique reads
linear-5' junctions
unique reads
linear-3' junctions
Maass2017platelets 5 4 0 0
muscle 3 3 0 0
adipose 6 5 5 8
WAS2 7 6 3 5
right_atrium 3 3 5 5
vena_cava 5 5 3 2
EPC 2 2 4 3
Jeck2013Hs68_RNase 555 171 34 28
Hs68_control 21 19 46 39
Memczak2013cd_34 29 8 6 0
HEK293 1 1 8 3
cd_19 32 11 4 4
Rybak2015SY5Y_exp2_D0 3 3 13 11
cerebellum 68 53 31 29
Sy5y_exp1_D0 7 6 19 26
frontal_cortex 213 93 33 25
parietal_lobe 140 85 41 33
temporal_lobe 106 50 24 8
Sy5y_exp1_D2 6 6 19 21
SY5Y_exp2_D8 2 2 13 10
occipital_lobe 162 85 26 18
SY5Y_exp2_D4 2 2 15 12
Sy5y_exp1_D4 6 6 15 20
diencephalon 103 70 51 35
Salzman2013K562 47 37 28 27
Mcf7 19 5 9 16
Gm12878 123 76 22 37
Sknshra 56 28 38 34
H1hesc 27 16 20 29
Bj 112 47 40 30
Nhek 32 15 15 8
Huvec 10 7 33 23
Helas3 86 51 49 26
Hepg2 87 40 39 29
A549 79 43 43 36
Ag04450 105 64 58 38
Aligned readsMemczak 2013 circRNA study (pooled samples)
Resized JPEG graphic