| ID | hsa_circ_0000277 | |||||
| Alias | hsa_circ_001456 | |||||
| Position | chr11:14793482-14810788 | |||||
| Strand | + | |||||
| Genomic length | 17306 | |||||
| Spliced sequence length | 437 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_000922 | |||||
| Gene symbol | PDE3B | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | adipose | 3 | 2 | 0 | 27 | vena_cava | 2 | 2 | 0 | 3 |
| Memczak2013 | neutr | 6 | 2 | 1 | 2 | cd_19 | 1 | 1 | 0 | 0 |
| Jeck2013 | Hs68_RNase | 20 | 17 | 0 | 4 | Hs68_control | 1 | 1 | 0 | 0 |
| Rybak2015 | cerebellum | 65 | 40 | 0 | 71 | Sy5y_exp1_D0 | 6 | 5 | 0 | 18 | frontal_cortex | 211 | 61 | 0 | 47 | parietal_lobe | 42 | 31 | 0 | 52 | temporal_lobe | 89 | 32 | 0 | 54 | Sy5y_exp1_D2 | 5 | 4 | 0 | 20 | occipital_lobe | 108 | 45 | 0 | 45 | SY5Y_exp2_D4 | 3 | 3 | 0 | 12 | Sy5y_exp1_D4 | 5 | 4 | 0 | 11 | diencephalon | 22 | 20 | 0 | 31 |
| Salzman2013 | K562 | 27 | 19 | 0 | 68 | Helas3 | 10 | 5 | 0 | 22 | Hepg2 | 10 | 5 | 1 | 20 | A549 | Sknshra | 2 | 1 | 0 | 2 | H1hesc | 1 | 1 | 2 | 30 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||