ID hsa_circ_0000419
Aliashsa_circ_000568
Position chr12:70193988-70195501
Strand +
Genomic length 1513
Spliced sequence length 242
Annotation
  • ANNOTATED
  • CDS
  • coding
  • INTERNAL
  • OVCODE
  • OVEXON
Repeats None
Best transcript NM_175623
Gene symbol RAB3IP
Scores circRNA study Sample total reads
circular junction
unique reads
circular junction
unique reads
linear-5' junctions
unique reads
linear-3' junctions
Maass2017HUAEC 3 3 3 3
WAS2 6 5 2 5
vena_cava 27 18 3 5
EPC 3 2 0 0
neutophils 8 5 0 0
LCL 3 2 2 3
VSMC 2 2 0 2
platelets 30 15 3 2
muscle 3 3 0 0
ada_scid 2 2 0 4
adipose 5 5 0 0
decidua 3 3 0 0
umbilical_cord 6 5 0 0
right_atrium 7 6 7 5
Jeck2013Hs68_RNase 54 36 2 0
Hs68_control 2 2 10 10
Memczak2013neutr 2 2 0 0
Rybak2015SY5Y_exp2_D0 3 3 4 4
cerebellum 320 156 56 61
Sy5y_exp1_D0 3 3 5 10
frontal_cortex 517 131 33 53
parietal_lobe 437 145 46 49
temporal_lobe 150 52 31 36
Sy5y_exp1_D2 5 5 6 7
SY5Y_exp2_D8 3 2 7 11
occipital_lobe 217 101 29 52
SY5Y_exp2_D4 4 3 8 2
Sy5y_exp1_D4 5 5 12 14
diencephalon 271 125 53 56
Salzman2013K562 18 14 16 13
Gm12878 134 62 27 13
Sknshra 42 20 6 3
H1hesc 22 16 23 14
Bj 7 5 0 0
Nhek 50 19 6 10
Huvec 22 4 3 2
Helas3 10 5 4 8
Hepg2 8 3 2 3
A549 15 9 5 1
Ag04450 6 3 1 1
Aligned readsMemczak 2013 circRNA study (pooled samples)
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