ID | hsa_circ_0000566 | |||||
Alias | hsa_circ_002156 | |||||
Position | chr14:97299803-97327072 | |||||
Strand | + | |||||
Genomic length | 27269 | |||||
Spliced sequence length | 1073 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_003384 | |||||
Gene symbol | VRK1 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | LCL | 7 | 5 | 12 | 18 | platelets | 10 | 7 | 0 | 3 | ada_scid | 2 | 2 | 13 | 13 | WAS2 | 6 | 5 | 13 | 15 | vena_cava | 2 | 2 | 3 | 3 | MSC_047 | 2 | 2 | 0 | 0 |
Memczak2013 | cd_34 | 17 | 3 | 12 | 2 | HEK293 | 5 | 5 | 4 | 0 | neutr | 3 | 3 | 2 | 2 | cd_19 | 28 | 11 | 33 | 7 |
Rybak2015 | SY5Y_exp2_D0 | 3 | 3 | 9 | 26 | cerebellum | 49 | 39 | 35 | 44 | Sy5y_exp1_D0 | 19 | 11 | 13 | 31 | frontal_cortex | 191 | 79 | 32 | 44 | parietal_lobe | 58 | 44 | 19 | 47 | temporal_lobe | 52 | 31 | 26 | 42 | Sy5y_exp1_D2 | 15 | 12 | 8 | 16 | occipital_lobe | 95 | 52 | 29 | 32 | SY5Y_exp2_D4 | 2 | 2 | 5 | 16 | Sy5y_exp1_D4 | 11 | 10 | 10 | 23 | diencephalon | 68 | 53 | 34 | 52 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |