| ID | hsa_circ_0000591 | |||||
| Alias | hsa_circ_000021 | |||||
| Position | chr15:41961025-41962156 | |||||
| Strand | + | |||||
| Genomic length | 1131 | |||||
| Spliced sequence length | 1131 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001164273 | |||||
| Gene symbol | MGA | |||||
| Experimental exidence | ||||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | WAS2 | 4 | 4 | 7 | 8 | vena_cava | 6 | 6 | 4 | 9 | LCL | 4 | 3 | 5 | 5 | ada_scid | 2 | 2 | 4 | 5 | muscle | 2 | 2 | 0 | 2 | platelets | 11 | 9 | 0 | 0 | adipose | 4 | 4 | 0 | 2 | right_atrium | 4 | 4 | 0 | 6 |
| Memczak2013 | HEK293 | 2 | 2 | 2 | 6 | cd_19 | 2 | 1 | 4 | 8 |
| Rybak2015 | SY5Y_exp2_D0 | 14 | 12 | 6 | 22 | cerebellum | 205 | 123 | 168 | 152 | Sy5y_exp1_D0 | 24 | 19 | 14 | 21 | frontal_cortex | 668 | 171 | 115 | 119 | parietal_lobe | 169 | 87 | 103 | 140 | temporal_lobe | 155 | 70 | 36 | 97 | Sy5y_exp1_D2 | 27 | 17 | 15 | 21 | SY5Y_exp2_D8 | 6 | 5 | 15 | 26 | occipital_lobe | 460 | 158 | 89 | 115 | SY5Y_exp2_D4 | 10 | 9 | 17 | 20 | Sy5y_exp1_D4 | 18 | 13 | 7 | 17 | diencephalon | 177 | 109 | 76 | 105 |
| Salzman2013 | K562 | 381 | 191 | 125 | 196 | Gm12878 | 22 | 14 | 22 | 63 | Sknshra | 83 | 33 | 150 | 57 | H1hesc | 47 | 24 | 44 | 68 | Bj | 26 | 10 | 60 | 19 | Nhek | 1 | 1 | 32 | 44 | Huvec | 43 | 10 | 65 | 25 | Helas3 | 44 | 22 | 149 | 42 | Hepg2 | 65 | 21 | 97 | 38 | Ag04450 | 95 | 41 | 127 | 50 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||