ID | hsa_circ_0000620 | |||||
Alias | hsa_circ_000603 | |||||
Position | chr15:67524151-67529158 | |||||
Strand | - | |||||
Genomic length | 5007 | |||||
Spliced sequence length | 462 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_024666 | |||||
Gene symbol | AAGAB | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | LCL | 2 | 2 | 2 | 13 | MSC_047 | 2 | 2 | 2 | 6 |
Jeck2013 | Hs68_RNase | 591 | 153 | 15 | 93 | Hs68_control | 16 | 14 | 64 | 96 |
Memczak2013 | HEK293 | 1 | 1 | 5 | 13 | cd_19 | 1 | 1 | 3 | 6 |
Rybak2015 | cerebellum | 49 | 36 | 46 | 39 | Sy5y_exp1_D0 | 6 | 6 | 30 | 50 | frontal_cortex | 247 | 100 | 75 | 72 | parietal_lobe | 52 | 38 | 47 | 52 | Sy5y_exp1_D2 | 5 | 4 | 30 | 55 | temporal_lobe | 65 | 37 | 37 | 30 | occipital_lobe | 114 | 62 | 47 | 32 | diencephalon | 71 | 55 | 108 | 102 |
Salzman2013 | K562 | 135 | 86 | 49 | 226 | Gm12878 | 30 | 14 | 29 | 46 | Sknshra | 10 | 4 | 33 | 39 | H1hesc | 27 | 14 | 44 | 50 | Nhek | 23 | 9 | 45 | 78 | Helas3 | 20 | 8 | 39 | 57 | Hepg2 | 9 | 5 | 36 | 54 | Ag04450 | 33 | 18 | 44 | 71 | A549 | 19 | 10 | 44 | 85 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |