| ID | hsa_circ_0000994 | |||||
| Alias | hsa_circ_000303 | |||||
| Position | chr2:40655612-40657444 | |||||
| Strand | - | |||||
| Genomic length | 1832 | |||||
| Spliced sequence length | 1832 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_021097 | |||||
| Gene symbol | SLC8A1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | osteocytes | 3 | 2 | 0 | 0 | chondrocytes | 7 | 5 | 0 | 0 | fibroblasts | 7 | 7 | 0 | 0 | vena_cava | 181 | 48 | 27 | 0 | placenta | 2 | 2 | 0 | 0 | decidua | 4 | 4 | 0 | 0 | umbilical_cord | 3 | 2 | 6 | 0 | cortex | 8 | 7 | 2 | 0 | right_atrium | 109 | 40 | 20 | 0 | MSC | 2 | 2 | 0 | 0 | MSC_047 | 3 | 2 | 0 | 0 |
| Memczak2013 | cd_34 | 12 | 5 | 0 | 0 | cd_19 | 16 | 9 | 0 | 4 |
| Rybak2015 | SY5Y_exp2_D0 | 8 | 7 | 0 | 0 | cerebellum | 306 | 161 | 155 | 0 | Sy5y_exp1_D0 | 13 | 10 | 3 | 0 | frontal_cortex | 1695 | 286 | 291 | 0 | parietal_lobe | 455 | 174 | 264 | 0 | temporal_lobe | 899 | 203 | 114 | 0 | Sy5y_exp1_D2 | 11 | 9 | 0 | 0 | SY5Y_exp2_D8 | 2 | 2 | 4 | 0 | occipital_lobe | 870 | 229 | 272 | 0 | SY5Y_exp2_D4 | 5 | 5 | 0 | 0 | Sy5y_exp1_D4 | 8 | 5 | 2 | 0 | diencephalon | 921 | 295 | 302 | 0 |
| Salzman2013 | Hsmm | 62 | 9 | 15 | 0 | Gm12878 | 15 | 9 | 6 | 0 | Sknshra | 143 | 44 | 35 | 0 | Bj | 373 | 101 | 74 | 0 | Nhek | 29 | 5 | 3 | 0 | A549 | 14 | 8 | 4 | 0 | Ag04450 | 288 | 74 | 57 | 0 | Hmec | 79 | 6 | 0 | 0 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||