ID | hsa_circ_0001165 | |||||
Alias | hsa_circ_001106 | |||||
Position | chr20:46252654-46262380 | |||||
Strand | + | |||||
Genomic length | 9726 | |||||
Spliced sequence length | 881 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_181659 | |||||
Gene symbol | NCOA3 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | LCL | 5 | 4 | 15 | 21 | platelets | 2 | 2 | 9 | 7 | ada_scid | 2 | 2 | 16 | 24 | chondrocytes | 2 | 2 | 9 | 6 | WAS2 | 2 | 2 | 25 | 32 |
Memczak2013 | cd_19 | 4 | 2 | 40 | 10 | |
Rybak2015 | SY5Y_exp2_D0 | 2 | 2 | 14 | 10 | cerebellum | 67 | 48 | 69 | 72 | Sy5y_exp1_D0 | 3 | 2 | 10 | 7 | frontal_cortex | 364 | 139 | 65 | 60 | parietal_lobe | 94 | 69 | 73 | 71 | temporal_lobe | 96 | 53 | 43 | 45 | Sy5y_exp1_D2 | 7 | 5 | 21 | 22 | occipital_lobe | 346 | 138 | 66 | 67 | Sy5y_exp1_D4 | 4 | 4 | 21 | 21 | diencephalon | 104 | 76 | 80 | 89 |
Salzman2013 | K562 | 15 | 12 | 134 | 140 | Mcf7 | 46 | 16 | 39 | 103 | Gm12878 | 22 | 14 | 84 | 177 | Sknshra | 2 | 2 | 71 | 53 | H1hesc | 1 | 1 | 13 | 49 | Bj | 3 | 3 | 30 | 48 | Nhek | 1 | 1 | 41 | 96 | Helas3 | 3 | 2 | 33 | 45 | Ag04450 | 13 | 8 | 72 | 60 | A549 | 4 | 4 | 123 | 122 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |