ID | hsa_circ_0001238 | |||||
Alias | hsa_circ_002065 | |||||
Position | chr22:42204878-42206295 | |||||
Strand | + | |||||
Genomic length | 1417 | |||||
Spliced sequence length | 326 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_024821 | |||||
Gene symbol | CCDC134 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | platelets | 2 | 2 | 0 | 0 | |
Jeck2013 | Hs68_RNase | 345 | 111 | 2 | 77 | Hs68_control | 13 | 12 | 10 | 20 |
Memczak2013 | cd_34 | 24 | 4 | 0 | 0 | cd_19 | 3 | 2 | 1 | 1 |
Rybak2015 | temporal_lobe | 19 | 12 | 5 | 30 | cerebellum | 32 | 25 | 25 | 31 | occipital_lobe | 39 | 25 | 17 | 34 | frontal_cortex | 63 | 43 | 14 | 37 | parietal_lobe | 28 | 25 | 18 | 30 | Sy5y_exp1_D4 | 2 | 2 | 0 | 3 | diencephalon | 28 | 23 | 18 | 40 |
Salzman2013 | K562 | 88 | 67 | 10 | 79 | Mcf7 | 66 | 13 | 8 | 24 | Nhlf | 30 | 3 | 4 | 1 | Gm12878 | 210 | 93 | 16 | 76 | Sknshra | 15 | 6 | 3 | 34 | H1hesc | 185 | 73 | 19 | 78 | Bj | 42 | 20 | 3 | 32 | Nhek | 79 | 26 | 2 | 20 | Huvec | 18 | 6 | 8 | 8 | Helas3 | 42 | 26 | 14 | 53 | Hepg2 | 60 | 24 | 15 | 38 | A549 | 9 | 4 | 8 | 43 | Ag04450 | 61 | 32 | 4 | 39 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |