| ID | hsa_circ_0001345 | |||||
| Alias | hsa_circ_000697 | |||||
| Position | chr3:142455220-142467302 | |||||
| Strand | + | |||||
| Genomic length | 12082 | |||||
| Spliced sequence length | 460 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001251845 | |||||
| Gene symbol | TRPC1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | platelets | 2 | 2 | 0 | 0 | muscle | 3 | 3 | 2 | 0 | vena_cava | 3 | 3 | 4 | 5 |
| Memczak2013 | HEK293 | 2 | 2 | 1 | 1 | |
| Jeck2013 | Hs68_RNase | 229 | 99 | 3 | 14 | Hs68_control | 19 | 17 | 27 | 33 |
| Rybak2015 | SY5Y_exp2_D0 | 2 | 2 | 0 | 2 | cerebellum | 115 | 76 | 62 | 111 | Sy5y_exp1_D0 | 16 | 13 | 3 | 6 | frontal_cortex | 548 | 155 | 69 | 188 | parietal_lobe | 96 | 62 | 41 | 104 | temporal_lobe | 173 | 62 | 35 | 120 | Sy5y_exp1_D2 | 17 | 14 | 4 | 3 | occipital_lobe | 324 | 117 | 45 | 135 | SY5Y_exp2_D4 | 4 | 4 | 2 | 7 | Sy5y_exp1_D4 | 10 | 9 | 2 | 6 | diencephalon | 110 | 74 | 66 | 122 |
| Salzman2013 | K562 | 13 | 9 | 1 | 5 | Bj | 2 | 2 | 2 | 2 | Helas3 | Ag04450 | 1 | 1 | 14 | 11 | A549 | 1 | 1 | 13 | 8 | Sknshra | 3 | 2 | 18 | 27 | H1hesc | 12 | 6 | 3 | 30 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||