| ID | hsa_circ_0001394 | |||||
| Alias | hsa_circ_000388 | |||||
| Position | chr4:6925099-6925838 | |||||
| Strand | + | |||||
| Genomic length | 739 | |||||
| Spliced sequence length | 739 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001113361 | |||||
| Gene symbol | TBC1D14 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | WAS2 | 2 | 2 | 2 | 6 | |
| Jeck2013 | Hs68_RNase | 32 | 27 | 0 | 14 | Hs68_control | 2 | 2 | 7 | 17 |
| Memczak2013 | cd_19 | 16 | 8 | 16 | 19 | |
| Rybak2015 | temporal_lobe | 8 | 4 | 8 | 30 | cerebellum | 5 | 5 | 52 | 53 | occipital_lobe | 18 | 9 | 24 | 48 | frontal_cortex | 19 | 12 | 26 | 59 | parietal_lobe | 5 | 4 | 38 | 59 | diencephalon | 3 | 3 | 32 | 69 |
| Salzman2013 | K562 | 54 | 43 | 8 | 85 | Mcf7 | Gm12878 | 23 | 14 | 3 | 10 | Sknshra | 1 | 1 | 22 | 10 | H1hesc | 15 | 10 | 14 | 19 | Nhek | 9 | 4 | 4 | 4 | Hepg2 | 4 | 3 | 32 | 0 | Ag04450 | 3 | 3 | 27 | 14 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||