ID | hsa_circ_0001615 | |||||
Alias | hsa_circ_001319 | |||||
Position | chr6:79752559-79770535 | |||||
Strand | - | |||||
Genomic length | 17976 | |||||
Spliced sequence length | 411 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_017934 | |||||
Gene symbol | PHIP | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | LCL | 2 | 2 | 4 | 12 | platelets | 13 | 10 | 0 | 3 | MSC_047 | 3 | 3 | 2 | 5 |
Memczak2013 | HEK293 | 1 | 1 | 8 | 14 | neutr | 1 | 1 | 1 | 6 | cd_19 |
Jeck2013 | Hs68_RNase | 72 | 49 | 4 | 14 | Hs68_control | 9 | 8 | 27 | 45 |
Rybak2015 | SY5Y_exp2_D0 | 3 | 3 | 21 | 32 | cerebellum | 204 | 127 | 95 | 176 | Sy5y_exp1_D0 | 11 | 8 | 16 | 36 | frontal_cortex | 1042 | 217 | 87 | 133 | parietal_lobe | 250 | 120 | 99 | 130 | temporal_lobe | 441 | 101 | 52 | 79 | Sy5y_exp1_D2 | 12 | 10 | 16 | 24 | occipital_lobe | 529 | 173 | 105 | 142 | Sy5y_exp1_D4 | 7 | 6 | 16 | 31 | diencephalon | 225 | 132 | 62 | 96 |
Salzman2013 | K562 | 119 | 70 | 106 | 362 | Mcf7 | 19 | 7 | 17 | 11 | Gm12878 | 55 | 29 | 87 | 137 | Sknshra | 19 | 10 | 81 | 82 | H1hesc | 154 | 67 | 188 | 183 | Bj | 15 | 5 | 44 | 52 | Nhek | 10 | 3 | 37 | 83 | Helas3 | 48 | 18 | 88 | 40 | Huvec | 13 | 5 | 25 | 49 | Hepg2 | 35 | 12 | 64 | 45 | A549 | 29 | 18 | 67 | 56 | Ag04450 | 48 | 26 | 71 | 78 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |