ID | hsa_circ_0001696 | |||||
Alias | hsa_circ_000755 | |||||
Position | chr7:35707043-35712888 | |||||
Strand | - | |||||
Genomic length | 5845 | |||||
Spliced sequence length | 347 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_022373 | |||||
Gene symbol | HERPUD2 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | HUAEC | 2 | 2 | 5 | 7 | platelets | 25 | 17 | 2 | 0 | WAS2 | 3 | 3 | 15 | 15 |
Memczak2013 | cd_19 | 2 | 2 | 4 | 3 | |
Rybak2015 | SY5Y_exp2_D0 | 4 | 4 | 14 | 12 | cerebellum | 172 | 118 | 47 | 102 | Sy5y_exp1_D0 | 19 | 15 | 17 | 17 | frontal_cortex | 549 | 140 | 36 | 87 | parietal_lobe | 187 | 88 | 40 | 77 | temporal_lobe | 120 | 56 | 13 | 39 | Sy5y_exp1_D2 | 5 | 5 | 23 | 23 | occipital_lobe | 423 | 154 | 30 | 85 | Sy5y_exp1_D4 | 4 | 4 | 10 | 12 | diencephalon | 172 | 113 | 39 | 78 |
Salzman2013 | K562 | 86 | 53 | 141 | 93 | Mcf7 | 23 | 3 | 0 | 33 | Gm12878 | 85 | 33 | 96 | 109 | Sknshra | 100 | 41 | 42 | 95 | H1hesc | 67 | 21 | 46 | 104 | Bj | 42 | 19 | 11 | 63 | Nhek | 49 | 16 | 49 | 93 | Helas3 | 58 | 22 | 20 | 93 | Hepg2 | 69 | 23 | 11 | 79 | A549 | 61 | 32 | 21 | 70 | Ag04450 | 53 | 29 | 46 | 70 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |