| ID | hsa_circ_0001747 | |||||
| Alias | hsa_circ_001440 | |||||
| Position | chr7:131071878-131084192 | |||||
| Strand | + | |||||
| Genomic length | 12314 | |||||
| Spliced sequence length | 535 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_013255 | |||||
| Gene symbol | MKLN1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | platelets | 10 | 10 | 8 | 5 | WAS2 | 4 | 3 | 12 | 15 | vena_cava | 2 | 2 | 4 | 9 |
| Jeck2013 | Hs68_RNase | 144 | 73 | 73 | 67 | Hs68_control | 9 | 7 | 53 | 73 |
| Memczak2013 | neutr | 2 | 1 | 4 | 8 | cd_19 | 4 | 2 | 2 | 8 |
| Rybak2015 | cerebellum | 44 | 35 | 111 | 108 | Sy5y_exp1_D0 | 3 | 3 | 17 | 30 | frontal_cortex | 128 | 64 | 74 | 90 | parietal_lobe | 25 | 21 | 40 | 89 | temporal_lobe | 60 | 23 | 25 | 65 | Sy5y_exp1_D2 | 3 | 3 | 20 | 34 | SY5Y_exp2_D8 | 2 | 2 | 9 | 21 | occipital_lobe | 84 | 46 | 73 | 76 | SY5Y_exp2_D4 | 2 | 2 | 12 | 27 | Sy5y_exp1_D4 | 4 | 3 | 14 | 36 | diencephalon | 34 | 30 | 88 | 89 |
| Salzman2013 | K562 | 33 | 20 | 144 | 420 | Gm12878 | 10 | 4 | 62 | 103 | Sknshra | 1 | 1 | 105 | 99 | H1hesc | 19 | 6 | 62 | 97 | Bj | Hepg2 | Ag04450 | 11 | 8 | 85 | 86 | A549 | 6 | 3 | 83 | 68 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||