ID | hsa_circ_0001806 | |||||
Alias | hsa_circ_001780 | |||||
Position | chr8:68018139-68028357 | |||||
Strand | + | |||||
Genomic length | 10218 | |||||
Spliced sequence length | 432 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_024790 | |||||
Gene symbol | CSPP1 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Jeck2013 | Hs68_RNase | 30 | 23 | 16 | 9 | Hs68_control | 2 | 2 | 15 | 14 |
Memczak2013 | HEK293 | 1 | 1 | 2 | 1 | cd_19 | 11 | 4 | 2 | 0 |
Rybak2015 | SY5Y_exp2_D0 | 2 | 2 | 5 | 2 | cerebellum | 13 | 12 | 38 | 59 | frontal_cortex | 71 | 37 | 67 | 56 | parietal_lobe | 44 | 30 | 58 | 41 | temporal_lobe | 56 | 25 | 36 | 16 | occipital_lobe | 49 | 31 | 60 | 28 | Sy5y_exp1_D4 | 2 | 2 | 0 | 0 | diencephalon | 38 | 27 | 36 | 51 |
Salzman2013 | K562 | 22 | 18 | 101 | 184 | Mcf7 | 4 | 1 | 0 | 24 | Gm12878 | 6 | 4 | 4 | 76 | Sknshra | 4 | 3 | 5 | 39 | H1hesc | 2 | 2 | 5 | 84 | Bj | 5 | 2 | 3 | 23 | Huvec | 1 | 1 | 0 | 46 | Hepg2 | 7 | 1 | 2 | 54 | Ag04450 | 7 | 5 | 8 | 74 | A549 | 5 | 2 | 0 | 53 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |