| ID | hsa_circ_0001850 | |||||
| Alias | hsa_circ_001782 | |||||
| Position | chr9:33960823-33973235 | |||||
| Strand | - | |||||
| Genomic length | 12412 | |||||
| Spliced sequence length | 278 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_018449 | |||||
| Gene symbol | UBAP2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | cd_34 | 10 | 1 | 0 | 4 | cd_19 | 4 | 3 | 4 | 3 |
| Jeck2013 | Hs68_RNase | 110 | 34 | 4 | 150 | Hs68_control | 3 | 3 | 16 | 24 |
| Rybak2015 | temporal_lobe | 31 | 15 | 41 | 83 | cerebellum | 19 | 13 | 19 | 85 | occipital_lobe | 62 | 23 | 44 | 108 | frontal_cortex | 88 | 25 | 62 | 136 | parietal_lobe | 17 | 11 | 37 | 99 | diencephalon | 24 | 15 | 48 | 91 |
| Salzman2013 | K562 | 29 | 22 | 40 | 137 | Bj | 1 | 1 | 4 | 43 | Nhek | 8 | 4 | 18 | 111 | Helas3 | 2 | 2 | 7 | 63 | Hepg2 | Gm12878 | 3 | 3 | 11 | 107 | Ag04450 | 7 | 6 | 26 | 63 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||