ID | hsa_circ_0001855 | |||||
Alias | hsa_circ_000488 | |||||
Position | chr9:36375930-36376124 | |||||
Strand | - | |||||
Genomic length | 194 | |||||
Spliced sequence length | 194 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_194329 | |||||
Gene symbol | RNF38 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | platelets | 2 | 2 | 4 | 2 | |
Memczak2013 | cd_19 | 9 | 2 | 12 | 6 | |
Rybak2015 | temporal_lobe | 16 | 6 | 54 | 38 | Sy5y_exp1_D2 | 3 | 3 | 10 | 13 | cerebellum | 39 | 34 | 82 | 73 | occipital_lobe | 60 | 44 | 114 | 55 | frontal_cortex | 138 | 77 | 116 | 55 | parietal_lobe | 36 | 30 | 128 | 72 | diencephalon | 60 | 43 | 76 | 62 |
Salzman2013 | K562 | 18 | 15 | 27 | 46 | Mcf7 | 10 | 1 | 12 | 16 | Gm12878 | 37 | 16 | 65 | 78 | Sknshra | 15 | 6 | 71 | 43 | H1hesc | 46 | 16 | 115 | 148 | Bj | 22 | 8 | 51 | 17 | Nhek | 30 | 6 | 22 | 33 | Huvec | 20 | 3 | 45 | 52 | Helas3 | 8 | 5 | 66 | 45 | Hepg2 | 9 | 3 | 61 | 28 | A549 | 36 | 10 | 35 | 32 | Ag04450 | 38 | 15 | 71 | 41 |
Aligned reads | Memczak 2013 circRNA study (pooled samples) |