| ID | hsa_circ_0001868 | |||||
| Alias | hsa_circ_000999 | |||||
| Position | chr9:88233897-88248289 | |||||
| Strand | - | |||||
| Genomic length | 14392 | |||||
| Spliced sequence length | 1033 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_015239 | |||||
| Gene symbol | AGTPBP1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | platelets | 2 | 2 | 3 | 8 | adipose | 2 | 2 | 3 | 2 | right_atrium | 3 | 3 | 5 | 7 | vena_cava | 3 | 3 | 3 | 7 |
| Jeck2013 | Hs68_RNase | 38 | 25 | 3 | 22 | Hs68_control | 1 | 1 | 22 | 29 |
| Memczak2013 | HEK293 | 1 | 1 | 5 | 9 | neutr | 1 | 1 | 11 | 10 | cd_19 | 1 | 1 | 0 | 3 |
| Rybak2015 | cerebellum | 100 | 71 | 134 | 210 | Sy5y_exp1_D0 | 7 | 6 | 14 | 16 | frontal_cortex | 321 | 112 | 199 | 338 | parietal_lobe | 78 | 54 | 139 | 216 | temporal_lobe | 120 | 51 | 137 | 198 | Sy5y_exp1_D2 | 6 | 6 | 34 | 24 | SY5Y_exp2_D8 | 11 | 10 | 37 | 41 | occipital_lobe | 316 | 125 | 217 | 391 | SY5Y_exp2_D4 | 6 | 5 | 35 | 38 | Sy5y_exp1_D4 | 7 | 7 | 33 | 31 | diencephalon | 65 | 46 | 183 | 255 |
| Salzman2013 | Helas3 | 1 | 1 | 2 | 10 | Ag04450 | 2 | 2 | 1 | 7 | Gm12878 | 1 | 1 | 6 | 24 | Sknshra | H1hesc | 1 | 1 | 10 | 34 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||