| ID | hsa_circ_0001953 | |||||
| Alias | hsa_circ_001871 | |||||
| Position | chrY:2821949-2829687 | |||||
| Strand | + | |||||
| Genomic length | 7738 | |||||
| Spliced sequence length | 662 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_003411 | |||||
| Gene symbol | ZFY | |||||
| Experimental exidence | ||||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | WAS2 | 3 | 3 | 0 | 2 | vena_cava | 4 | 3 | 0 | 0 |
| Memczak2013 | cd_34 | 5 | 2 | 0 | 0 | cd_19 | 10 | 2 | 1 | 0 |
| Jeck2013 | Hs68_RNase | 337 | 108 | 15 | 2 | Hs68_control | 13 | 11 | 19 | 35 |
| Rybak2015 | occipital_lobe | 97 | 47 | 7 | 19 | frontal_cortex | 185 | 53 | 7 | 12 | parietal_lobe | 23 | 16 | 2 | 4 | diencephalon | 66 | 40 | 7 | 16 |
| Salzman2013 | K562 | H1hesc | 5 | 2 | 2 | 10 | Bj | 25 | 12 | 15 | 8 | Helas3 | 6 | 3 | 4 | 1 | Huvec | Hepg2 | A549 | 22 | 7 | 4 | 12 | Ag04450 | 50 | 26 | 28 | 32 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||