ID | hsa_circ_0002158 | |||||
Position | chr1:8601272-8617582 | |||||
Strand | - | |||||
Genomic length | 16310 | |||||
Spliced sequence length | 308 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_012102 | |||||
Gene symbol | RERE | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | platelets | 9 | 6 | 2 | 2 | ada_scid | 4 | 4 | 0 | 3 | WAS2 | 4 | 4 | 6 | 3 | cortex | 4 | 4 | 3 | 2 |
Jeck2013 | Hs68_RNase | 71 | 46 | 59 | 49 | Hs68_control | 4 | 4 | 10 | 11 |
Rybak2015 | SY5Y_exp2_D0 | 3 | 3 | 5 | 8 | cerebellum | 870 | 288 | 240 | 144 | Sy5y_exp1_D0 | 2 | 2 | 10 | 4 | frontal_cortex | 7270 | 728 | 564 | 337 | parietal_lobe | 1550 | 299 | 292 | 159 | temporal_lobe | 4904 | 545 | 341 | 226 | Sy5y_exp1_D2 | 2 | 2 | 9 | 3 | occipital_lobe | 3569 | 528 | 454 | 324 | SY5Y_exp2_D4 | 3 | 3 | 4 | 3 | Sy5y_exp1_D4 | 5 | 5 | 8 | 8 | diencephalon | 2159 | 411 | 295 | 219 |
Salzman2013 | K562 | 98 | 64 | 57 | 71 | Gm12878 | 73 | 32 | 51 | 54 | Sknshra | 15 | 10 | 57 | 23 | H1hesc | 147 | 56 | 97 | 73 | Nhek | 9 | 4 | 16 | 17 | Huvec | 8 | 2 | 23 | 28 | Helas3 | 21 | 13 | 72 | 30 | Hepg2 | 20 | 8 | 84 | 18 | A549 | 32 | 21 | 89 | 42 | Ag04450 | 19 | 14 | 69 | 33 |