| ID | hsa_circ_0002454 | |||||
| Position | chr1:65830317-65831879 | |||||
| Strand | + | |||||
| Genomic length | 1562 | |||||
| Spliced sequence length | 350 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_014787 | |||||
| Gene symbol | DNAJC6 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | platelets | 103 | 32 | 0 | 2 | muscle | 2 | 2 | 0 | 0 | umbilical_cord | 2 | 2 | 0 | 0 |
| Jeck2013 | Hs68_RNase | 536 | 169 | 6 | 23 | Hs68_control | 11 | 11 | 6 | 47 |
| Rybak2015 | SY5Y_exp2_D0 | 7 | 6 | 4 | 13 | cerebellum | 277 | 147 | 95 | 170 | Sy5y_exp1_D0 | 10 | 9 | 11 | 19 | frontal_cortex | 921 | 213 | 154 | 214 | parietal_lobe | 243 | 117 | 108 | 177 | temporal_lobe | 348 | 106 | 73 | 178 | Sy5y_exp1_D2 | 12 | 9 | 7 | 18 | SY5Y_exp2_D8 | 4 | 3 | 5 | 6 | occipital_lobe | 462 | 172 | 121 | 180 | SY5Y_exp2_D4 | 4 | 4 | 0 | 13 | Sy5y_exp1_D4 | 7 | 5 | 7 | 15 | diencephalon | 216 | 123 | 229 | 362 |
| Salzman2013 | K562 | 159 | 107 | 14 | 181 | Gm12878 | 1 | 1 | 0 | 0 | Sknshra | 22 | 14 | 4 | 31 | H1hesc | Bj | 34 | 15 | 5 | 23 | Nhek | 23 | 6 | 0 | 20 | Huvec | 9 | 4 | 0 | 3 | Helas3 | 37 | 20 | 0 | 6 | Hepg2 | 9 | 4 | 0 | 7 | A549 | 20 | 10 | 0 | 7 |