ID | hsa_circ_0006508 | |||||
Position | chr17:57808781-57816308 | |||||
Strand | + | |||||
Genomic length | 7527 | |||||
Spliced sequence length | 440 | |||||
Annotation |
| |||||
Repeats | None | |||||
Best transcript | NM_030938 | |||||
Gene symbol | VMP1 | |||||
Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
---|---|---|---|---|---|---|
Maass2017 | HUAEC | 3 | 3 | 18 | 23 | osteocytes | 2 | 2 | 22 | 8 | WAS2 | 4 | 3 | 13 | 9 | vena_cava | 3 | 3 | 7 | 8 | EPC | 2 | 2 | 11 | 8 | neutophils | 16 | 11 | 41 | 36 | platelets | 9 | 9 | 3 | 0 | decidua | 2 | 2 | 14 | 7 | cortex | 3 | 3 | 5 | 7 |
Jeck2013 | Hs68_RNase | 158 | 78 | 4 | 62 | Hs68_control | 24 | 18 | 118 | 103 |
Rybak2015 | SY5Y_exp2_D0 | 2 | 2 | 30 | 25 | cerebellum | 223 | 127 | 84 | 214 | frontal_cortex | 764 | 195 | 102 | 233 | parietal_lobe | 202 | 113 | 74 | 153 | temporal_lobe | 383 | 124 | 90 | 145 | Sy5y_exp1_D2 | 9 | 9 | 34 | 35 | SY5Y_exp2_D8 | 5 | 5 | 23 | 17 | occipital_lobe | 386 | 161 | 77 | 199 | SY5Y_exp2_D4 | 2 | 2 | 30 | 22 | Sy5y_exp1_D4 | 8 | 7 | 26 | 29 | diencephalon | 245 | 138 | 112 | 200 |
Salzman2013 | K562 | 89 | 51 | 32 | 182 | Mcf7 | 54 | 6 | 1 | 31 | Gm12878 | 65 | 26 | 6 | 78 | Sknshra | 45 | 27 | 22 | 66 | H1hesc | 6 | 3 | 5 | 76 | Bj | 16 | 10 | 10 | 40 | Nhek | 18 | 2 | 12 | 90 | Helas3 | 12 | 6 | 2 | 75 | Huvec | 11 | 3 | 9 | 46 | Hepg2 | 10 | 4 | 2 | 63 | A549 | 27 | 13 | 24 | 98 | Ag04450 | 37 | 24 | 16 | 67 |