| ID | hsa_circ_0008621 | |||||
| Position | chr5:43292575-43297268 | |||||
| Strand | - | |||||
| Genomic length | 4693 | |||||
| Spliced sequence length | 899 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001098272 | |||||
| Gene symbol | HMGCS1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 5 | 5 | 38 | 260 | Hs68_control |
| Rybak2015 | temporal_lobe | 97 | 25 | 218 | 192 | cerebellum | 11 | 10 | 179 | 67 | occipital_lobe | 117 | 32 | 279 | 163 | frontal_cortex | 232 | 61 | 293 | 217 | parietal_lobe | 33 | 23 | 202 | 133 | diencephalon | 22 | 19 | 345 | 198 |
| Salzman2013 | K562 | 18 | 16 | 338 | 174 | Gm12878 | 19 | 9 | 100 | 54 | H1hesc | 3 | 2 | 159 | 124 | Helas3 | 11 | 6 | 68 | 27 | Huvec | 7 | 2 | 73 | 29 | Nhek | 36 | 11 | 197 | 122 | Hepg2 | 4 | 1 | 29 | 24 | A549 | 3 | 3 | 45 | 15 |