| ID | hsa_circ_0023942 | |||||
| Position | chr11:85733409-85742653 | |||||
| Strand | - | |||||
| Genomic length | 9244 | |||||
| Spliced sequence length | 322 | |||||
| Annotation |
| |||||
| Repeats | NA | |||||
| Best transcript | NM_007166 | |||||
| Gene symbol | PICALM | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | neutophils | 5 | 5 | 14 | 31 | HUAEC | 5 | 4 | 20 | 30 | VSMC | 2 | 2 | 8 | 10 | platelets | 10 | 8 | 3 | 28 | WAS2 | 2 | 2 | 12 | 23 | vena_cava | 5 | 5 | 7 | 21 |
| Rybak2015 | cerebellum | 71 | 50 | 134 | 297 | Sy5y_exp1_D0 | 2 | 2 | 29 | 43 | frontal_cortex | 367 | 116 | 159 | 476 | parietal_lobe | 90 | 58 | 144 | 260 | temporal_lobe | 119 | 49 | 74 | 271 | Sy5y_exp1_D2 | 3 | 3 | 41 | 36 | occipital_lobe | 298 | 100 | 158 | 448 | Sy5y_exp1_D4 | 4 | 4 | 25 | 29 | diencephalon | 95 | 62 | 163 | 282 |
| Salzman2013 | K562 | 99 | 62 | 388 | 437 | Nhlf | Gm12878 | 16 | 10 | 78 | 37 | Sknshra | 8 | 6 | 110 | 26 | H1hesc | 2 | 1 | 69 | 24 | Bj | 13 | 6 | 110 | 23 | Nhek | Helas3 | 11 | 7 | 154 | 15 | Huvec | 6 | 2 | 108 | 28 | Hepg2 | 7 | 5 | 178 | 12 | A549 | 5 | 2 | 82 | 23 | Ag04450 | 23 | 13 | 156 | 80 |