| ID | hsa_circ_0042823 | |||||
| Position | chr17:28011580-28022541 | |||||
| Strand | - | |||||
| Genomic length | 10961 | |||||
| Spliced sequence length | 187 | |||||
| Annotation |
| |||||
| Repeats | NA | |||||
| Best transcript | NM_033389 | |||||
| Gene symbol | SSH2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | temporal_lobe | 7 | 4 | 37 | 18 | cerebellum | 11 | 8 | 45 | 23 | occipital_lobe | 12 | 8 | 45 | 29 | frontal_cortex | 55 | 28 | 65 | 36 | parietal_lobe | 23 | 19 | 66 | 21 | diencephalon | 17 | 16 | 42 | 40 |
| Salzman2013 | Gm12878 | 11 | 7 | 274 | 312 | Sknshra | 9 | 3 | 139 | 58 | H1hesc | 8 | 3 | 52 | 89 | Bj | 8 | 5 | 27 | 15 | Helas3 | 4 | 2 | 51 | 27 | Huvec | 4 | 2 | 74 | 83 | Nhek | 15 | 3 | 49 | 92 | A549 | 11 | 4 | 68 | 42 | Ag04450 | 7 | 5 | 99 | 82 |