| ID | hsa_circ_0049356 | |||||
| Position | chr19:11024552-11027453 | |||||
| Strand | + | |||||
| Genomic length | 2901 | |||||
| Spliced sequence length | 351 | |||||
| Annotation |
| |||||
| Repeats | SINE | |||||
| Best transcript | NM_199141 | |||||
| Gene symbol | CARM1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | temporal_lobe | 86 | 34 | 44 | 47 | cerebellum | 29 | 23 | 59 | 49 | occipital_lobe | 134 | 73 | 72 | 39 | frontal_cortex | 183 | 84 | 80 | 61 | parietal_lobe | 66 | 46 | 105 | 66 | diencephalon | 43 | 36 | 75 | 73 |
| Salzman2013 | K562 | 13 | 11 | 110 | 92 | Mcf7 | 18 | 4 | 236 | 160 | Gm12878 | 41 | 22 | 119 | 113 | Sknshra | 17 | 10 | 121 | 72 | H1hesc | 43 | 16 | 234 | 162 | Bj | 44 | 15 | 50 | 71 | Nhek | 12 | 4 | 162 | 103 | Helas3 | 47 | 18 | 135 | 105 | Huvec | 32 | 9 | 104 | 55 | Hepg2 | 18 | 8 | 133 | 103 | A549 | 32 | 14 | 56 | 40 | Ag04450 | 36 | 22 | 106 | 70 |