| ID | mmu_circ_0000250 | |||||
| Alias | C2C12_circ_000885, mm9_circ_014561 | |||||
| Position | chr11:29605534-29608770 | |||||
| Strand | + | |||||
| Genomic length | 3236 | |||||
| Spliced sequence length | 2418 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_194051 | |||||
| Gene symbol | Rtn4 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | mm_ES | 2 | 1 | 6 | 7 | mm_brain1 | 4 | 2 | 9 | 30 | mm_head | 5 | 3 | 3 | 10 |
| Rybak2015 | cerebellum | 16 | 10 | 4 | 21 | P19_exp2_D0 | 8 | 6 | 6 | 30 | frontal_cortex | 5 | 4 | 8 | 35 | sy_cell | 6 | 6 | 14 | 23 | hindbrain | 70 | 20 | 78 | 172 | P19_exp1_D4 | 11 | 11 | 12 | 39 | sy_snpt | 4 | 4 | 7 | 15 | PN_D28 | 4 | 4 | 3 | 28 | P19_exp1_D2 | 4 | 3 | 8 | 30 | PN_D14 | 4 | 4 | 21 | 49 | P19_exp1_D12 | 50 | 25 | 15 | 36 | P19_exp2_D4 | 8 | 7 | 10 | 39 | forebrain | 173 | 63 | 185 | 490 | P19_exp2_D12 | 14 | 11 | 14 | 53 | midbrain | 36 | 16 | 106 | 244 | PN_D21 | 9 | 6 | 12 | 32 | PN_D01 | 26 | 13 | 14 | 30 | PN_D07 | 16 | 8 | 10 | 49 | hippocampus | 5 | 5 | 11 | 40 |